| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Coral Sea and GBR | Sea/Bay/Gulf | native | 5439 |
| Dauin-Apo I. | Sea/Bay/Gulf | native | 127519 |
| Erh-jen-shi | Sea/Bay/Gulf | native | 43515 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 75154 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 5439 |
| Hsiao-liu-chiu | Sea/Bay/Gulf | native | 43515 |
| Indian Ocean | Sea/Bay/Gulf | native | 111072 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5439 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Manning-Hawkesbury | Sea/Bay/Gulf | native | 75154 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 5439 |
| Pacific Ocean | Sea/Bay/Gulf | native | 592 |
| Polynesian Waters | Sea/Bay/Gulf | native | 5439 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 41650 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Spratly Islands | Sea/Bay/Gulf | native | 48445 |
| Tahiti I. | Sea/Bay/Gulf | native | 89972 |
| Verde Island Passage | Sea/Bay/Gulf | native | 6956 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |