| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arabian Sea | Sea/Bay/Gulf | native | 9893 |
| Chiku River | River (basin) | native | 36073 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Erhjen River | River (basin) | native | 36073 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 9893 |
| Indian Ocean | Sea/Bay/Gulf | native | 9893 |
| Indonesian Sea | Sea/Bay/Gulf | native | 9893 |
| Lagonoy Gulf | Sea/Bay/Gulf | native | 43283 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 43020 |
| Pacific Ocean | Sea/Bay/Gulf | native | 12711 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45161 |
| Shiliao River | River (basin) | native | 36073 |
| Sorsogon Bay | Sea/Bay/Gulf | native | 47531 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 125575 |