| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Congo | River (basin) | native | 43912 |
| Ethiopian | Zoogeographic realm | endemic | 3570 |
| Itimbiri | River (basin) | native | 43912 |
| Kasai | River (basin) | native | 43912 |
| Kwango | River (basin) | native | 43912 |
| Kwilu | River (basin) | native | 43912 |
| Lomami | River (basin) | native | 43912 |
| Lualaba | River (basin) | native | 106245 |
| Lukenie | River (basin) | native | 127185 |
| Lulonga | River (basin) | native | 43912 |
| Middle Congo | River (basin) | native | 43912 |
| Mongala | River (basin) | native | 43912 |
| Ruki | River (basin) | native | 43912 |
| Sangha | River (basin) | native | 43912 |
| Sankuru | River (basin) | native | 43912 |
| Ubangui | River (basin) | native | 43912 |
| Upper Zambezi | River (basin) | native | 43912 |
| Wagenia Falls | River (basin) | native | 106245 |
| Zambezi | River (basin) | native | 43912 |