| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Indian Ocean | Sea/Bay/Gulf | native | 5978 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Leyte Gulf | Sea/Bay/Gulf | native | 68980 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3131 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 115274 |