| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 7247 |
| Indian Ocean | Sea/Bay/Gulf | native | 7247 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7247 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7247 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 7247 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 115274 |