| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 4329 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Carigara Bay | Sea/Bay/Gulf | native | 46323 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 9710 |
| Ethiopian | Zoogeographic realm | native | 33390 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Indian Ocean | Sea/Bay/Gulf | native | 1602 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7050 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45205 |
| Pacific Ocean | Sea/Bay/Gulf | native | 9710 |
| Pagbilao Bay | Sea/Bay/Gulf | native | 11338 |
| Polynesian Waters | Sea/Bay/Gulf | native | 4517 |
| Red Sea | Sea/Bay/Gulf | native | 12541 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tañon Strait | Sea/Bay/Gulf | native | 11337 |
| Verde Island Passage | Sea/Bay/Gulf | native | 6956 |