| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Central and Southern Great Barrier Reef | Sea/Bay/Gulf | native | 75154 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 2334 |
| Dauin-Apo I. | Sea/Bay/Gulf | native | 127519 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Houtman | Sea/Bay/Gulf | native | 75154 |
| Indian Ocean | Sea/Bay/Gulf | native | 37816 |
| Indonesian Sea | Sea/Bay/Gulf | native | 2334 |
| Kuroshio Current | Sea/Bay/Gulf | native | 37424 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Pacific Ocean | Sea/Bay/Gulf | native | 592 |
| Polynesian Waters | Sea/Bay/Gulf | native | 89972 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tahiti I. | Sea/Bay/Gulf | native | 89972 |