| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agnébi | River (basin) | native | 272 |
| Bandama | River (basin) | native | 57126 |
| Bia | River (basin) | native | 57126 |
| Boubo | River (basin) | native | 57126 |
| Buba | River (basin) | native | 28587 |
| Casamance | River (basin) | native | 57126 |
| Cavally | River (basin) | native | 57126 |
| Cess | River (basin) | native | 57126 |
| Comoé | River (basin) | native | 57126 |
| Corubal | River (basin) | native | 57126 |
| Ébrié | Lagoon | native | 28587 |
| Ethiopian | Zoogeographic realm | endemic | 7324 |
| Fatala | River (basin) | native | 28587 |
| Gambia | River (basin) | native | 57126 |
| Géba | River (basin) | native | 57126 |
| Great Scarcies | River (basin) | native | 57126 |
| Kogon | River (basin) | native | 57126 |
| Konkouré | River (basin) | native | 57126 |
| Little Scarcies | River (basin) | native | 57126 |
| Lofa | River (basin) | native | 57126 |
| Moa | River (basin) | native | 13331 |
| Pampana | River (basin) | native | 57126 |
| Pra | River (basin) | native | 57126 |
| Rokel | River (basin) | native | 57126 |
| Saint John | River (basin) | native | 13331 |
| Saint Paul | River (basin) | native | 13331 |
| San Pedro | River (basin) | native | 57126 |
| Sanaga | River (basin) | questionable | 81642 |
| Sassandra | River (basin) | native | 57126 |
| Senegal | River (basin) | native | 57126 |
| Sewa | River (basin) | native | 57126 |
| Tano | River (basin) | native | 272 |
| Wouri | River (basin) | questionable | 81642 |