| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Balsas river | River (basin) | native | 85798 |
| Golfo de Fonseca | Sea/Bay/Gulf | native | 93843 |
| Gulf of California | Sea/Bay/Gulf | native | 9284 |
| Laguna del Mar Muerto | Lagoon | native | 74889 |
| Neotropical | Zoogeographic realm | endemic | 9284 |
| Pacific Central-American Coastal | Sea/Bay/Gulf | native | 9284 |
| Pacific Ocean | Sea/Bay/Gulf | native | 9284 |
| Peru-Galapagos Waters | Sea/Bay/Gulf | native | 5590 |